Please wait a minute...
Data Analysis and Knowledge Discovery
Current Issue | Archive | Adv Search |
Biomedical Abstractive Summarization Based on Knowledge Enhancement
Deng Lu,Hu Po,Li Xuanhong
(Hubei Provincial Key Laboratory of Artificial Intelligence and Smart Learning, Central China Normal University, Wuhan 430079, China) (School of Computer Science, Central China Normal University, Wuhan 430079, China) (National Language Resources Monitoring & Research Center for Network Media, Central China Normal University, Wuhan 430079, China)
Download:
Export: BibTeX | EndNote (RIS)      
Abstract  

[Objective] Mapping the biomedical text to the super thesaurus in the biomedical field to obtain the biomedical terms contained in the text and their corresponding concepts, and integrate the terms and concepts as background knowledge into the text summary model to improve the text summary model in biomedicine The quality of the summary generation on the text.

[Methods] This method first obtains the important content of the text through extractive abstract technology, and then combines the important content of the text with the knowledge base in the biomedical field to extract the terms contained in the important content of the text and its corresponding knowledge base concept, and integrate it into the neural network generative abstract as background knowledge In the attention mechanism of the model, the model can not only focus on the important information inside the text under the guidance of domain knowledge, but also suppress the noise problems that may occur due to the introduction of external information, and significantly improve the quality of abstract generation.

[Results] The experimental results on three biomedical field data sets verify the effectiveness of the proposed method. The average ROUGE of the proposed model PG-meta on the three data sets reaches 31.06, which is 1.51 higher than the average ROUGE of the original PG model.

[Limitations] The impact of different ways of acquiring background knowledge in biomedical fields on the effectiveness of model enhancement remains to be further explored.

[Conclusions] The proposed method can help the model better learn the deep meaning of biomedical texts and improve the quality of abstract generation.


Key words Biomedical text mining      generative abstract      domain knowledge      knowledge enhancement      
Published: 01 July 2022
ZTFLH:  TP393,G250  

Cite this article:

Deng Lu, Hu Po, Li Xuanhong. Biomedical Abstractive Summarization Based on Knowledge Enhancement . Data Analysis and Knowledge Discovery, 0, (): 1-.

URL:

https://manu44.magtech.com.cn/Jwk_infotech_wk3/EN/10.11925/infotech.2096-3467.2022-0034     OR     https://manu44.magtech.com.cn/Jwk_infotech_wk3/EN/Y0/V/I/1

[1] Li Xuesi, Zhang Zhixiong, Wang Yufei, Liu Yi. A Review on Methods for Domain Knowledge Evolution Analysis[J]. 数据分析与知识发现, 2024, 8(1): 1-15.
[2] Pei Wei, Sun Shuifa, Li Xiaolong, Lu Ji, Yang Liu, Wu Yirong. Medical Named Entity Recognition with Domain Knowledge[J]. 数据分析与知识发现, 2023, 7(3): 142-154.
[3] Jing Shenqi, Zhao Youlin. Extracting Medical Entity Relationships with Domain-Specific Knowledge and Distant Supervision[J]. 数据分析与知识发现, 2022, 6(6): 105-114.
[4] Deng Lu,Hu Po,Li Xuanhong. Abstracting Biomedical Documents with Knowledge Enhancement[J]. 数据分析与知识发现, 2022, 6(11): 1-12.
[5] Jia Minghua, Wang Xiuli. Quantifying Logical Relations of Financial Risks with BERT and Mutual Information[J]. 数据分析与知识发现, 2022, 6(10): 68-78.
[6] Wang Yizhen,Ou Shiyan,Chen Jinju. Automatic Abstracting Civil Judgment Documents with Two-Stage Procedure[J]. 数据分析与知识发现, 2021, 5(5): 104-114.
[7] Chen Guo,Xiao Lu. Linking Knowledge Elements from Online Community[J]. 数据分析与知识发现, 2017, 1(11): 75-83.
[8] Hu Xinming, Luo Jianjun, Xia Huosong. Research on Interactive Recommender System Based on Commodity Domain Knowledge[J]. 现代图书情报技术, 2014, 30(10): 56-62.
[9] Song Wen, Huang Jinxia, Liu Yi, Tang Yijie. SKE Key Technologies and Services for Knowledge Discovery[J]. 现代图书情报技术, 2012, 28(7): 13-18.
[10] Shen Dongjing, Xu Yongli, Xia Bo. Application and Research of Scientist Network in Plant Sciences Research[J]. 现代图书情报技术, 2012, 28(7): 27-32.
  Copyright © 2016 Data Analysis and Knowledge Discovery   Tel/Fax:(010)82626611-6626,82624938   E-mail:jishu@mail.las.ac.cn